Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 54551
Gene Symbol: MAGEL2
MAGEL2
0.010 GeneticVariation disease BEFREE Patients with MAGEL2 variants shared several features with PWS, such as neonatal hypotonia, poor suck, and obesity; however, there were also unique features, including arthrogryposis and a failure to acquire meaningful words. 31791363 2019
Entrez Id: 259232
Gene Symbol: NALCN
NALCN
0.050 GeneticVariation disease BEFREE Importantly, NALCN mutations lead to complex neurodevelopmental syndromes, including infantile hypotonia with psychomotor retardation and characteristic facies (IHPRF) and congenital contractures of limbs and face, hypotonia and developmental delay (CLIFAHDD), which are recessively and dominantly inherited, respectively. 31409833 2019
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.010 GeneticVariation disease BEFREE To distinguish this subset of affected individuals from the DRPLA diagnosis, we suggest using the term CHEDDA (congenital hypotonia, epilepsy, developmental delay, digit abnormalities) to classify the condition. 30827498 2019
Entrez Id: 285175
Gene Symbol: UNC80
UNC80
0.040 GeneticVariation disease BEFREE Patient 2 was compound heterozygous for two novel mutations, c.3226C>T (p.Arg1076Ter) and c.3205C>T (p.Arg1069Ter), in UNC80, a known gene of infantile hypotonia with psychomotor retardation and characteristic facies-2 (IHPRF2). 30771478 2019
Entrez Id: 6261
Gene Symbol: RYR1
RYR1
0.020 GeneticVariation disease BEFREE Here we broaden the spectrum of clinical manifestations associated with homozygous/compound heterozygous RYR1 gene variants to include a wide range of manifestations from FADS through neonatal hypotonia to a 35-year-old male with AMC and PhD degree. 30652412 2019
Entrez Id: 259232
Gene Symbol: NALCN
NALCN
0.050 GeneticVariation disease BEFREE So far, biallelic NALCN and UNC80 variants have been described in a small number of individuals leading to infantile hypotonia, psychomotor retardation, and characteristic facies 1 (IHPRF1, OMIM 615419) and 2 (IHPRF2, OMIM 616801), respectively. 30167850 2018
Entrez Id: 285175
Gene Symbol: UNC80
UNC80
0.040 GeneticVariation disease BEFREE So far, biallelic NALCN and UNC80 variants have been described in a small number of individuals leading to infantile hypotonia, psychomotor retardation, and characteristic facies 1 (IHPRF1, OMIM 615419) and 2 (IHPRF2, OMIM 616801), respectively. 30167850 2018
Entrez Id: 93627
Gene Symbol: TBCK
TBCK
0.020 Biomarker disease BEFREE Further delineation of TBCK - Infantile hypotonia with psychomotor retardation and characteristic facies type 3. 30103036 2019
Entrez Id: 3908
Gene Symbol: LAMA2
LAMA2
0.010 Biomarker disease BEFREE MDC1A usually presents as a severe neonatal hypotonia and failure to thrive. 30055037 2018
Entrez Id: 259232
Gene Symbol: NALCN
NALCN
0.050 GeneticVariation disease BEFREE Biallelic mutations in NALCN are responsible for infantile hypotonia with psychomotor retardation and characteristic facies 1 (IHPRF1). 29968795 2018
Entrez Id: 57731
Gene Symbol: SPTBN4
SPTBN4
0.010 GeneticVariation disease BEFREE Here, we report bi-allelic pathogenic SPTBN4 variants (three homozygous and two compound heterozygous) that cause a severe neurological syndrome that includes congenital hypotonia, intellectual disability, and motor axonal and auditory neuropathy. 29861105 2018
Entrez Id: 285175
Gene Symbol: UNC80
UNC80
0.040 GeneticVariation disease BEFREE Biallelic UNC80 mutations caused infantile hypotonia with psychomotor retardation and characteristic facies 2 in two Chinese patients with variable phenotypes. 29572195 2018
Entrez Id: 285175
Gene Symbol: UNC80
UNC80
0.040 GeneticVariation disease BEFREE In this study, we report on a novel homozygous mutation in UNC80 in a Palestinian-Emirati patient suffering infantile hypotonia with psychomotor retardation and characteristic facies. 29430593 2018
Entrez Id: 93627
Gene Symbol: TBCK
TBCK
0.020 GeneticVariation disease BEFREE The neurological phenotype of children with TBCK p.R126X mutations, which we call TBCK-encephaloneuronopathy (TBCKE), include congenital hypotonia, progressive motor neuronopathy, leukoencephalopathy, and epilepsy. 29283439 2018
Entrez Id: 259232
Gene Symbol: NALCN
NALCN
0.050 Biomarker disease BEFREE Loss-of function mutations in NALCN on chromosome 13q, a sodium leak channel that maintains baseline neuronal excitability, cause infantile hypotonia with psychomotor retardation and characteristic faces 1 (IHPRF1, OMIM #615419). 29168298 2018
Entrez Id: 246329
Gene Symbol: STAC3
STAC3
0.010 GeneticVariation disease BEFREE Horstick et al.(2013) previously reported a homozygous p.Trp284Ser variant in STAC3 as the cause of Native American myopathy (NAM) in 5 Lumbee Native American families with congenital hypotonia and weakness, cleft palate, short stature, ptosis, kyphoscoliosis, talipes deformities, and susceptibility to malignant hyperthermia (MH). 28777491 2017
Entrez Id: 8506
Gene Symbol: CNTNAP1
CNTNAP1
0.010 GeneticVariation disease BEFREE Two novel variants in CNTNAP1 in two siblings presenting with congenital hypotonia and hypomyelinating neuropathy. 27782105 2017
Entrez Id: 51305
Gene Symbol: KCNK9
KCNK9
0.010 Biomarker disease BEFREE Patients with KCNK9 imprinting syndrome demonstrate congenital hypotonia, variable cleft palate, normal MRIs and EEGs, delayed development, and feeding problems. 27151206 2016
Entrez Id: 773
Gene Symbol: CACNA1A
CACNA1A
0.010 Biomarker disease BEFREE Genetic testing of CACNA1A in patients with congenital hypotonia and developmental delay may be warranted. 26739101 2016
Entrez Id: 259232
Gene Symbol: NALCN
NALCN
0.050 GeneticVariation disease BEFREE Loss-of-function mutations of NALCN cause infantile hypotonia with psychomotor retardation and characteristic facies (IHPRF). 26708751 2016
Entrez Id: 58
Gene Symbol: ACTA1
ACTA1
0.010 GeneticVariation disease BEFREE We conclude that mutations in ACTA1 can cause pathologic features consistent with myofibrillar myopathy, and mutations in ACTA1 should be considered in patients with severe congenital hypotonia associated with muscle weakness and features of myofibrillar myopathy. 25913210 2015
Entrez Id: 4534
Gene Symbol: MTM1
MTM1
0.020 GeneticVariation disease BEFREE An autosomal dominant form of CNM results from mutations in the gene encoding dynamin 2 (DNM2), and loss-of-function mutations in the gene encoding myotubularin (MTM1) result in X-linked CNM (XLCNM, also called myotubular myopathy), which promotes severe neonatal hypotonia and early death. 24569376 2014
Entrez Id: 100038247
Gene Symbol: PTLS
PTLS
0.010 Biomarker disease BEFREE Potocki-Lupski syndrome (PTLS, OMIM: 610883) is a microduplication syndrome characterized by infantile hypotonia, failure to thrive, cardiovascular malformations, developmental delay, intellectual disability, and behavior abnormalities, the latter of which can include autism spectrum disorder. 24311450 2014
Entrez Id: 3141
Gene Symbol: HLCS
HLCS
0.010 Biomarker disease BEFREE Hypotonia-cystinuria syndrome (HCS, OMIM606407) is characterized by infantile hypotonia, poor feeding, and growth hormone deficiency. 23794250 2013
Entrez Id: 54205
Gene Symbol: CYCS
CYCS
0.010 Biomarker disease BEFREE Hypotonia-cystinuria syndrome (HCS, OMIM606407) is characterized by infantile hypotonia, poor feeding, and growth hormone deficiency. 23794250 2013